The TransAtlasDB toolkit is written in Perl and can be run on diverse hardware systems where the standard Perl modules have been installed.
This Perl toolkit requires the Perl modules to be installed on the local system.
install TransAtlasDB system
verify connection details or create connection details (used only when requested)
import samples metadata and RNAseq data into the database
view or export reports based on user-defined queries
interactive interface to explore database content
contains the TransAtlasDB relational database schema
contains sample files and templates
contains required routines and modules
Please click the menu items to navigate through this repository. If you have questions, comments and bug reports, please email me directly.
Thank you very much for your help and support!